RNA m6A demethylase ALKBH5 regulates the development of γδ T cells

Chenbo Ding#, Hao Xu#, Zhibin Yu#, Manolis Roulis, Rihao Qu, Jing Zhou, Joonseok Oh, Jason Crawford, Yimeng Gao, Ruaidhrí Jackson, Esen Sefik, Simiao Li, Zheng Wei, Mathias Skadow, Zhinan Yin, Xinshou Ouyang, Lei Wang, Qiang Zou, Bing Su, Weiguo Hu*, Richard A Flavell*, Hua-Bing Li*. PNAS. August 8,2022.

γδ T cell is abundant T cell population and is critical in mucosal tissue homeostasis as well as immunoregulation, while its detailed developmental mechanisms remain poorly understood. Our previous studies have demonstrated N6-methyladenosine (m6A) plays important roles in controlling the homeostasis, differentiation and function of CD4+ αβ T cells, but whether it plays a role in γδ T cell biology is still unclear. Here we show that depletion of m6A demethylase ALKBH5 in lymphocytes specifically induces an expansion of γδ T cells, which confers enhanced protection against gastrointestinal S. typhimurium infection. Mechanistically, loss of ALKBH5 favors the development of γδ T cell precursors by increasing the abundance of m6A RNA modification in thymocytes, which further reduces the expression of several target genes including Notch signaling components Jagged1 and Notch2. As a result, impairment of Jagged1/Notch2 signaling contributes to enhanced proliferation and differentiation of γδ T cell precursors, leading to an expanded mature γδ T cell repertoire. Taken together, our results indicate a checkpoint role of ALKBH5 and m6A modification in the regulation of γδ T cell early development.